stubs.model_buildingΒΆ

Classes/functions used to construct models

Classes

CompartmentDF()

Dimensionality refers to the topological dimension (e.g.

ParameterDF()

A standard (non time-dependent) parameter has an associated value, unit,

ReactionDF()

A reaction is specified by the reactants/products on the left hand side (LHS), right hand side (RHS), kinetic parameters, the reaction type (STUBS will always assume mass action unless specified otherwise).

SpeciesDF()

IC assumed to be in terms concentration units